help button home button JAMIA Hate scrolling?
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH

First published August 21, 2007 as JAMIA PrePrint; doi:10.1197/jamia.M2407
Journal of the American Medical Informatics Association 2007;14(6):772-780
© 2007 American Medical Informatics Association


A more recent version of this article appeared on November 1, 2007
This Article
Right arrow Full Text (PDF)
Right arrow All Versions of this Article:
M2407v1
14/6/772    most recent
Right arrow Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when eLetters are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Sneiderman, C. A.
Right arrow Articles by Rindflesch, T. C.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Sneiderman, C. A.
Right arrow Articles by Rindflesch, T. C.

Submitted on February 21, 2007
Accepted on July 26, 2007

Knowledge-Based Methods to Help Clinicians Find Answers in MEDLINE

Charles A. Sneiderman MD, PhD1*, Dina Demner-Fushman MD, PhD1, Marcelo Fiszman MD, PhD2, Nicholas C. Ide1, and Thomas C. Rindflesch PhD1

Affiliation of the authors: 1 Lister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, MD ; 2 Graduate School of Medicine, University of Tennessee, Knoxville, TN

* To whom correspondence should be addressed.

Objective Large databases of published medical research can support clinical decision making by providing physicians with the best available evidence. The time required to obtain optimal results from these databases using traditional systems often makes accessing the databases impractical for clinicians. This paper explores whether a hybrid approach of augmenting traditional information retrieval with knowledge-based methods facilitates finding practical clinical advice in the research literature.

Design Three experimental systems were evaluated for their ability to find MEDLINETM citations providing answers to clinical questions of different complexity. The systems (SemRep, Essie, and CQA-1.0), which rely on domain knowledge and semantic processing to a varying extent, were evaluated separately and in combination. Fifteen therapy and prevention questions in three categories (general questions, intermediate, and specific) were searched. The first ten citations retrieved by each system were randomized, anonymized, and evaluated on a three-point scale. The reasons for ratings were documented.

Measurements Metrics evaluating the overall performance of a system (Mean Average Precision - MAP, Binary Preference - Bpref) and metrics evaluating the number of relevant documents in the first several presented to a physician were used.

Results Scores (MAP=0.57, Bpref=0.71) for fusion of the retrieval results of the three systems are significantly (p < 0.01) better than those for any individual system. All three systems present three to four relevant citations in the first five for any question type.

Conclusion The improvements in finding relevant MEDLINE citations due to knowledge-based processing show promise in assisting physicians answer questions in clinical practice.







HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH
Copyright © 1994 by the American Medical Informatics Association.